Selected Publications for ATTO 390:
P. Céspedes, A. Jainarayanan, L. Fernández-Messina, S. Valvo, D. Saliba, E. Kurz, A. Kvalvaag, L. Chen, C. Ganskow, H. Colin-York, M. Fritzsche, Y. Peng, T. Dong, E. Johnson, J. Siller-Farfán, O. Dushek, E. Sezgin, B. Peacock, A. Law, D. Aubert, S. Engledow, M. Attar, S. Hester, R. Fischer, F. Sánchez-Madrid, M. Dustin, T-cell trans-synaptic vesicles are distinct and carry greater effector content than constitutive extracellular vesicles, Nature Communications 13, 1 (2022).
V. Collin-Faure, B. Dalzon, J. Devcic, H. Diemer, S. Cianférani, T. Rabilloud, Does size matter?, Environmental Science: Nano 9, 2827 (2022).
N. Liebe, I. Mey, L. Vuong, F. Shikho, B. Geil, A. Janshoff, C. Steinem, Bioinspired Membrane Interfaces, ACS applied materials & interfaces 15, 11586 (2023).
S. Takamori, P. Cicuta, S. Takeuchi, L. Di Michele, DNA-assisted selective electrofusion (DASE) of Escherichia coli and giant lipid vesicles, Nanoscale 14, 14255 (2022).
K. Ingenbosch, J. Vieyto-Nuñez, Y. Ruiz-Blanco, C. Mayer, K. Hoffmann-Jacobsen, E. Sanchez-Garcia, Effect of Organic Solvents on the Structure and Activity of a Minimal Lipase, The Journal of Organic Chemistry 87, 1669 (2022).
E. Alphandéry, Light-Interacting iron-based nanomaterials for localized cancer detection and treatment, Acta Biomaterialia 124, 50 (2021).
E. Höllmüller, S. Geigges, M. Niedermeier, K.-M. Kammer, S. Kienle, D. Rösner, M. Scheffner, A. Marx, F. Stengel, Site-specific ubiquitylation acts as a regulator of linker histone H1, Nature Communications 12, 1 (2021).
S. Suarasan, C. Tira, M. Rusu, A.-M. Craciun, M. Focsan, Controlled fluorescence manipulation by core-shell multilayer of spherical gold nanoparticles, Journal of Molecular Structure 1244, 130950 (2021).
Aaron M. Joffe, Matthew H. Bakalar, Daniel A. Fletcher, Macrophage phagocytosis assay with reconstituted target particles, Nature Protocols 15, 2230 (2020).
Aaron M. Joffe, Matthew H. Bakalar, Daniel A. Fletcher, Macrophage phagocytosis assay with reconstituted target particles, Nature Protocols 15, 2230 (2020).
W. Hirst, C. Kiefer, M. Abdosamadi, E. Schäffer, S. Reber, In Vitro Reconstitution and Imaging of Microtubule Dynamics by Fluorescence and Label-free Microscopy, STAR Protocols 1, 100177 (2020).
S. Puthukodan, E. Murtezi, J. Jacak, T. Klar, Localization STED (LocSTED) microscopy with 15 nm resolution, Nanophotonics 9, 783 (2020).
S. Putzke, E. Feldhues, I. Heep, T. Ilg, A. Lamprecht, Cationic lipid/pDNA complex formation as potential generic method to generate specific IRF pathway stimulators, European Journal of Pharmaceutics and Biopharmaceutics 155, 112 (2020).
T. Sansen, D. Sanchez-Fuentes, R. Rathar, A. Colom-Diego, F. El Alaoui, J. Viaud, M. Macchione, S. de Rossi, S. Matile, R. Gaudin, V. Bäcker, A. Carretero-Genevrier, L. Picas, Mapping Cell Membrane Organization and Dynamics Using Soft Nanoimprint Lithography, ACS Applied Materials & Interfaces (2020).
D. Kellis, C. Sarter, B. Cannon, P. Davis, E. Graugnard, J. Lee, R. Pensack, T. Kolmar, A. Jäschke, B. Yurke, W. Knowlton, An All-Optical Excitonic Switch Operated in the Liquid and Solid Phases, ACS Nano 13, 2986 (2019).
S. Mandal, X. Zhou, S. Lin, H. Yan, N. Woodbury, Directed Energy Transfer through DNA-Templated J-Aggregates, Bioconjugate Chemistry 30, 1870 (2019).
I. Moscetti, S. Cannistraro, A. Bizzarri, Probing direct interaction of oncomiR-21-3p with the tumor suppressor p53 by fluorescence, FRET and atomic force spectroscopy, Archives of Biochemistry and Biophysics 671, 35 (2019).
N. Bernardes, A. Garizo, S. Pinto, B. Caniço, C. Perdigão, F. Fernandes, A. Fialho, Azurin interaction with the lipid raft components ganglioside GM-1 and caveolin-1 increases membrane fluidity and sensitivity to anti-cancer drugs, Cell cycle (Georgetown, Tex.) 17, 1649 (2018).
É. Boulais, N. Sawaya, R. Veneziano, A. Andreoni, J. Banal, T. Kondo, S. Mandal, S. Lin, G. Schlau-Cohen, N. Woodbury, H. Yan, A. Aspuru-Guzik, M. Bathe, Programmed coherent coupling in a synthetic DNA-based excitonic circuit, Nature materials 17, 159 (2018).
C. Hammer, K. Falahati, A. Jakob, R. Klimek, I. Burghardt, A. Heckel, J. Wachtveitl, Sensitized Two-Photon Activation of Coumarin Photocages, The Journal of Physical Chemistry Letters 9, 1448 (2018).
G. Langer, T. Berer, Fluorescence quantum yield and excited state lifetime determination by phase sensitive photoacoustics, Optics Letters 43, 5074 (2018).
H.-R. Lee, Y. Cho, G. Lee, D.‐g. You, Y. Yoo, Y. Kim, A direct role for hepatitis B virus X protein in inducing mitochondrial membrane permeabilization, Journal of Viral Hepatitis 25, 412 (2018).
A. Bouissou, A. Proag, N. Bourg, K. Pingris, C. Cabriel, S. Balor, T. Mangeat, C. Thibault, C. Vieu, G. Dupuis, E. Fort, S. Lévêque-Fort, I. Maridonneau-Parini, R. Poincloux, Podosome Force Generation Machinery, ACS Nano 11, 4028 (2017).
C. Carbone, N. Kern, R. Fernandes, E. Hui, X. Su, K. Garcia, R. Vale, In vitro reconstitution of T cell receptor-mediated segregation of the CD45 phosphatase, Proceedings of the National Academy of Sciences 114, E9338-E9345 (2017)
J. Banal, T. Kondo, R. Veneziano, M. Bathe, G. Schlau-Cohen, Photophysics of J-Aggregate-Mediated Energy Transfer on DNA, The journal of physical chemistry letters 8, 5827 (2017).
R. Blom, S. Erni, K. Krempaská, O. Schaerer, R. van Dijk, M. Amacker, C. Moser, S. Hall, C. von Garnier, F. Blank, A Triple Co-Culture Model of the Human Respiratory Tract to Study Immune-Modulatory Effects of Liposomes and Virosomes, PLOS ONE 11, e0163539 (2016).
J. Marro, C. Pfefferli, A.-S. Charles, T. Bise, A. Jaźwińska, Collagen XII Contributes to Epicardial and Connective Tissues in the Zebrafish Heart during Ontogenesis and Regeneration, PLOS ONE 11, e0165497 (2016).
F. Savić, T.-T. Kliesch, S. Verbeek, C. Bao, J. Thiart, A. Kros, B. Geil, A. Janshoff, Geometry of the Contact Zone between Fused Membrane-Coated Beads Mimicking Cell-Cell Fusion, Biophysical Journal 110, 2216 (2016).
E. Schmid, M. Bakalar, K. Choudhuri, J. Weichsel, H. Ann, P. Geissler, M. Dustin, D. Fletcher, Size-dependent protein segregation at membrane interfaces, Nature Physics 12, 704 (2016).
A. Burtey, M. Wagner, E. Hodneland, K. Skaftnesmo, J. Schoelermann, I. Mondragon, H. Espedal, A. Golebiewska, S. Niclou, R. Bjerkvig, Intercellular transfer of transferrin receptor by a contact-, Rab8-dependent mechanism involving tunneling nanotubes, The FASEB Journal 29, 4695 (2015).
A. Llobera, J. Juvert, A. González-Fernández, B. Ibarlucea, E. Carregal-Romero, S. Büttgenbach, C. Fernández-Sánchez, Biofunctionalized all-polymer photonic lab on a chip with integrated solid-state light emitter, Light: Science & Applications 4, e271 (2015).
J.J. Babcock, L. Brancaleon, The Effect of Local Dynamics of Atto 390-Labeled Lysozyme on Fluorescence Anisotropy Modeling, Biopolymers 103, 285 (2015).
Z. Hashim, M. Green et al., Gd-containing conjugated polymer nanoparticles: bimodal nanoparticles for fluorscence and MRI imaging, Nanoscale 6, 8376 (2014).
I. Ziomkiewicz, A. Loman et al., Dynamic Conformational Transitions of the EGF Receptor in Living Mammalian Cells Determined by FRET and Fluorescence Lifetime Imaging Microscopy, Cytometry A 83, 794 (2013).
R.K. Singh, D. Seliktar, A.J. Putnam, Capillary morphogenesis in PEG-collagen hydrogels, Biomaterials 34, 9331 (2013).
D. Luo, C. Kuang et al., Experimental investigations on fluorescence excitation and depletion of ATTO 390 dye, Optics Laser Techn. 45, 723 (2013).
Q. Li, S. Seeger, Multidonor Deep-UV FRET Study of Protein - Ligand Binding and its Potential to Obtain Structure Information, J. Phys. Chem. B 115, 13643 (2011).
C. Kuang, W. Zhao, G. Wang, Far-field optical nanoscopy based on continuous wave laser stimulated emission depletion, Rev. Sci. Instr. 81, 053709 (2010).
P. Howes, M. Green et al., Magnetic Conjugated Polymer Nanoparticles as Bimodal Imaging Agents, J. Am. Chem. Soc. 132, 9833 (2010).
P. Howes, M. Green et al., Phospholipid Encapsulated Semiconducting Polymer Nanoparticles: Their Use in Cell Imaging and Protein Attachment, J. Am. Chem. Soc. 132, 3989 (2010).
S. Corrie, P. Sova, G. Lawrie, B. Battersby, N. Kiviat, M. Trau, Development of a multiplexed bead-based assay for detection of DNA methylation in cancer-related genes, Mol. Biosystems 5, 262 (2009).
D. Kozak, A. Chen, M. Trau, Profiling Protein-Surface Interactions of Multicomponent Suspensions via Flow Cytometry, Langmuir 24, 1204 (2008).
G. Zauner, E. Lonardi, L. Bubacco, T.J. Aartsma et al., Tryptophan to Dye Fluorescence Energy Transfer Applied to Oxygen Sensing by Using Type-3 Copper Proteins, Chem. Eur. J. 13, 7085 (2007).
