Selected Publications for ATTO 700:
S. Nazeer, A. Saraswathy, N. Nimi, H. Santhakumar, P. Radhakrishnapillai Suma, S. Shenoy, R. Jayasree, Near infrared-emitting multimodal nanosystem for in vitro magnetic hyperthermia of hepatocellular carcinoma and dual imaging of in vivo liver fibrosis, Scientific reports 13, 12947 (2023).
J. Ariztia, K. Solmont, N. Moïse, S. Specklin, M. Heck, S. Lamandé-Langle, B. Kuhnast, PET/Fluorescence Imaging, Bioconjugate Chemistry 33, 24 (2022).
N. Gimber, S. Strauss, R. Jungmann, J. Schmoranzer, Simultaneous Multicolor DNA-PAINT without Sequential Fluid Exchange Using Spectral Demixing, Nano Letters 22, 2682 (2022).
J. Seo, Y. Sim, J. Kim, H. Kim, I. Cho, H. Nam, Y.-G. Yoon, J.-B. Chang, PICASSO allows ultra-multiplexed fluorescence imaging of spatially overlapping proteins without reference spectra measurements, Nature Communications 13, 1 (2022).
M. Trumpp, A. Oliveras, H. Gonschior, J. Ast, D. Hodson, P. Knaus, M. Lehmann, M. Birol, J. Broichhagen, Enzyme self-label-bound ATTO700 in single-molecule and super-resolution microscopy, Chemical communications (Cambridge, England) 58, 13724 (2022).
Q. Best, R. Haack, K. Swift, B. Bax, S. Tetin, S. Hershberger, A rainbow of acridinium chemiluminescence, Luminescence 36, 1079 (2021).
C. Borgarelli, Y. Klingl, A. Escamilla-Ayala, S. Munck, L. van den Bosch, W. de Borggraeve, E. Ismalaj, Lighting up the plasma membrane, Chemistry – A European Journal (2021).
J. Maillard, C. Rumble, A. Fürstenberg, Red-Emitting Fluorophores as Local Water-Sensing Probes, The Journal of Physical Chemistry B 125, 9727 (2021).
A. Saraswathy, S. Nazeer, N. Nimi, H. Santhakumar, P. Suma, K. Jibin, M. Victor, F. Fernandez, S. Arumugam, S. Shenoy, P. Varma, R. Jayasree, Asialoglycoprotein receptor targeted optical and magnetic resonance imaging and therapy of liver fibrosis using pullulan stabilized multi-functional iron oxide nanoprobe, Scientific Reports 11, 1 (2021).
T. Schröder, S. Bange, J. Schedlbauer, F. Steiner, J. Lupton, P. Tinnefeld, J. Vogelsang, How Blinking Affects Photon Correlations in Multichromophoric Nanoparticles, ACS Nano 15, 18037 (2021).
Joel Selkrig, Nan Li, Annika Hausmann, Matthew S. J. Mangan, Matylda Zietek, André Mateus, Jacob Bobonis, Anna Sueki, Haruna Imamura, Bachir El Debs, Gianluca Sigismondo, Bogdan I. Florea, Herman S. Overkleeft, Nataša Kopitar-Jerala, Boris Turk, Pedro Beltrao, Mikhail M. Savitski, Eicke Latz, Wolf-Dietrich Hardt, Jeroen Krijgsveld, Athanasios Typas, Spatiotemporal proteomics uncovers cathepsin-dependent macrophage cell death during Salmonella infection, Nature Microbiology 5, 1119 (2020).
K.-T. Lam, E. Taylor, A. Thompson, M.-D. Ruepp, M. Lochner, M. Martinez, J. Brozik, Direct Measurement of Single-Molecule Ligand-Receptor Interactions, The journal of physical chemistry. B 124, 7791 (2020).
M. Olsman, V. Sereti, K. Andreassen, S. Snipstad, A. van Wamel, R. Eliasen, S. Berg, A. Urquhart, T. Andresen, C. Davies, Ultrasound-mediated delivery enhances therapeutic efficacy of MMP sensitive liposomes, Journal of Controlled Release 325, 121 (2020).
B. Piégu, P. Arensburger, L. Beauclair, M. Chabault, E. Raynaud, V. Coustham, S. Brard, S. Guizard, T. Burlot, E. Le Bihan-Duval, Y. Bigot, Variations in genome size between wild and domesticated lineages of fowls belonging to the Gallus gallus species, Genomics 112, 1660 (2020).
S. Shaffer, B. Emert, R. Reyes Hueros, C. Cote, G. Harmange, D. Schaff, A. Sizemore, R. Gupte, E. Torre, A. Singh, D. Bassett, A. Raj, Memory Sequencing Reveals Heritable Single-Cell Gene Expression Programs Associated with Distinct Cellular Behaviors, Cell 182, 947-959.e17 (2020).
B. Breiner, K. Johnson, M. Stolarek, A.-L. Silva, A. Negrea, N. Bell, T. Isaac, M. Dethlefsen, J. Chana, L. Ibbotson, R. Palmer, J. Bush, A. Dunning, D. Love, O. Pachoumi, D. Kelly, A. Shibahara, M. Wu, M. Sosna, P. Dear, F. Tolle, E. Petrini, M. Amasio, L. Shelford, M. Saavedra, E. Sheridan, J. Kuleshova, G. Podd, B. Balmforth, C. Frayling, Single-molecule detection of deoxyribonucleoside triphosphates in microdroplets, Nucleic Acids Research 47, e101-e101 (2019).
S. Rouhanifard, I. Mellis, M. Dunagin, S. Bayatpour, C. Jiang, I. Dardani, O. Symmons, B. Emert, E. Torre, A. Cote, A. Sullivan, J. Stamatoyannopoulos, A. Raj, ClampFISH detects individual nucleic acid molecules using click chemistry–based amplification, Nature Biotechnology 37, 84 (2019).
O. Symmons, M. Chang, I. Mellis, J. Kalish, J. Park, K. Suszták, M. Bartolomei, A. Raj, Allele-specific RNA imaging shows that allelic imbalances can arise in tissues through transcriptional bursting, PLOS Genetics 15, e1007874 (2019).
Y.-H. Ho, K.-J. Wang, P.-Y. Hung, Y.-S. Cheng, J.-R. Liu, S.-T. Fung, P.-H. Liang, J.-W. Chern, C.-W. Yu, A highly HDAC6-selective inhibitor acts as a fluorescent probe, Organic & biomolecular chemistry 16, 7820 (2018).
R. Hure, S. Simoneau, B. Chandler, J. Steele, Two-Color Metal-Enhanced Fluorescence Using Gold Slotted Nanogratings, Plasmonics 12, 1621 (2017).
F.-J. Meyer-Almes, Fluorescence lifetime based bioassays, Methods and Applications in Fluorescence 5, 42002 (2017).
D. Wu, S. Cheung, J. O'Sullivan, Y. Gao, Z.-l. Chen, D. O'Shea, Strained alkyne substituted near infrared BF 2 azadipyrromethene fluorochrome, RSC Advances 6, 87373 (2016).
C. Schirwitz, F.F. Loeffler et al., Purification of High-Complexity Peptide Microarrays by Spatially Resolved Array Transfer to Gold-Coated Membranes, Adv. Mater. 25, 1598 (2013).
H. Takeuchi, B. Omogo, C.D. Heyes, Are Bidentate Ligands Really Better than Monodentate Ligands For Nanoparticles?, Nano Lett. 13, 4746 (2013).
P. Haus, M. Korbus et al., Z. Cheng, D.R. Elias et al., Identification of Selective Class II Histone Deacetylase Inhibitors Using a Novel Dual-Parameter Binding Assay Based on Fluorescence Anisotropy and Lifetime, J. Biomol. Screen. 16, 1206 (2011).
D. Riester, C. Hildmann, P. Haus et al., Non-isotopic dual parameter competition assay suitable for high-throuput screening of histone deacetylases, Bioorg. Med. Chem. Lett. 19, 3651 (2009).
J. Vogelsang, T. Cordes, P. Tinnefeld, Single-molecule photophysics of oxazines on DNA and ist application in FRET switch, Photochem. Photobiol. Sci. 8, 486 (2009).
S. van der Linde et al., Multicolor Photoswitching Microscopy for Subdifraction-Resolution Fluorescence Imaging, Photochem. Photobiol. Sci. 2009, doi: 10.1039/b822533h
